Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCGCAGTTTGCTAGGG
.(((((((.((..(((((((((&)))))))))..)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001319035
GeneSymbolTEP1
Binding site4209,4231
Score0.923
Seed1
Au0.324
Energy-22.1
Binding len22
Me-9.486
Phylopstem1.8367134444444444
Phylopflank1.47424633875
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure