Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTAGGGCGGGGTG
((((.((.((((((((......&))))))))..)).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001319050
GeneSymbolBRPF1
Binding site4309,4327
Score0.846
Seed0
Au0.471
Energy-19.0
Binding len18
Me-10.37
Phylopstem0.6238064999999999
Phylopflank0.6314009775
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end2
Position3UTR
2D Structure