Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTAGAGGCCTGGGGCCCCTACCGGTCGTGAGGTGA
(((((((((((((((((((((.&)))))))))))...))))))..............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001319050
GeneSymbolBRPF1
Binding site4403,4442
Score1.0
Seed1
Au0.324
Energy-26.2
Binding len39
Me-3.938
Phylopstem0.9295840157894736
Phylopflank0.8782216650000001
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure