Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCATTTCCTAGTGAGCTGCCAGGA
.(((((((((((((((((((..&))))))))).....)))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001319105
GeneSymbolOPCML
Binding site3447,3475
Score0.846
Seed1
Au0.5
Energy-20.6
Binding len28
Me-3.793
Phylopstem0.09191614074074075
Phylopflank0.05710873749999995
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end6
Position3UTR
2D Structure