Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGAGCCCAGAGACAAGGCAGCTTGGTCTAGTGG
(((((((((((((((((((...&.)))))))...)))).))))......)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001319142
GeneSymbolAK2
Binding site1718,1754
Score0.846
Seed1
Au0.471
Energy-22.7
Binding len31
Me-3.938
Phylopstem-0.1395122586206897
Phylopflank0.21862810124999998
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end5
Position3UTR
2D Structure