Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGCTGGAGTGCAGTGG
((((((((((..((((((....&))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001319190
GeneSymbolSCIMP
Binding site670,690
Score0.923
Seed1
Au0.353
Energy-25.1
Binding len20
Me-10.109
Phylopstem0.28533709090909093
Phylopflank0.03713159999999999
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end4
Position3UTR
2D Structure