Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACTCCTGGAGGTGGGGAGTGAGGCAGGGATAAGGAAGGAGAGTATCCTCCAGCACCTTCCAGTGG
((((((((((((((((((((..&)))))...........................)))))))))..................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001319201
GeneSymbolS100A8
Binding site54,120
Score0.846
Seed1
Au0.441
Energy-20.1
Binding len66
Me-3.938
Phylopstem0.04063596615384611
Phylopflank0.8695049950000001
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end6
Position5UTR
2D Structure