Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTATGGGCTGTAGCAGTACACTGAATTGTACTGTGCCAGGG
.(((((((((((((.(((....&.))).)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001319239
GeneSymbolZC3H11A
Binding site4319,4362
Score0.862
Seed1
Au0.529
Energy-19.6
Binding len22
Me-4.529
Phylopstem0.47625201875
Phylopflank0.8649068412500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure