Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCTCCCCGGCCAGGTC
(((((((.......(((((...&))))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001319848
GeneSymbolUSP21
Binding site352,372
Score0.846
Seed1
Au0.412
Energy-17.9
Binding len20
Me-16.868
Phylopstem2.9474857142857145
Phylopflank1.9677806200000005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure