Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCATTTGCCCCCAGGGCCCGCAGCAAGGAGCGCAGA
..((((((((((((((((....&.)))))).........))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001319848
GeneSymbolUSP21
Binding site278,317
Score0.846
Seed1
Au0.368
Energy-22.4
Binding len28
Me-4.957
Phylopstem1.9500985499999999
Phylopflank2.0647090412500004
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure