Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGGCAGGGGCCACGTGT
(((((((((((.(((((.(...&).))))).)))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001319944
GeneSymbolCEP85
Binding site3548,3569
Score1.0
Seed1
Au0.397
Energy-25.6
Binding len21
Me-7.284
Phylopstem-0.39829359999999997
Phylopflank0.32111173375
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure