Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGGCTTTTAGCCAGC
..((((((...((((((((...&)))))))).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320047
GeneSymbolC1orf112
Binding site3455,3475
Score0.846
Seed1
Au0.456
Energy-20.3
Binding len20
Me-10.081
Phylopstem-0.3587641
Phylopflank0.14502191249999996
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure