Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGCAGCAGCGGC
((((.(((((((((((.....&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427201
GeneSymbolRORC
Binding site456,473
Score0.923
Seed0
Au0.426
Energy-22.4
Binding len17
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure