Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTGATTTAGAGTCAGAAGTCACTGAGGGGCCAAGTGT
(((((((((((((((((((((.&)))))..........)))).......))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320227
GeneSymbolNMD3
Binding site1629,1669
Score0.846
Seed1
Au0.485
Energy-22.6
Binding len40
Me-3.938
Phylopstem0.6058315025641026
Phylopflank2.2621630624999995
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure