Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320261
GeneSymbolSMIM12
Binding site2117,2140
Score0.923
Seed1
Au0.412
Energy-28.9
Binding len23
Me-10.109
Phylopstem-0.5728458272727273
Phylopflank-0.017164749999999986
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure