Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGACGAGGCTGCAGA
.....((((((((((((((..&)))))..))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001320350
GeneSymbolTRPM2
Binding site5369,5386
Score0.846
Seed0
Au0.309
Energy-25.3
Binding len17
Me-13.666
Phylopstem-0.7274019250000001
Phylopflank-0.8857280500000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure