Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCAGGCTATTTGTATGCTGGA
..(((((((((((.((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001320441
GeneSymbolUSP54
Binding site1219,1242
Score0.923
Seed1
Au0.544
Energy-17.3
Binding len17
Me-5.814
Phylopstem4.504858181818182
Phylopflank3.1591393387500006
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure