Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCATCCATTGGTCGGATGGCTGCAACCCCTGGAGCTGCAAC
((((((((.((((((((....&.)))))))...).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427294
GeneSymbolEMSY
Binding site1738,1781
Score1.0
Seed1
Au0.485
Energy-22.7
Binding len22
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure