Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTTAGAAATGGCTGAGTGA
((((((((..((((((((((((&)))))))))))).)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320653
GeneSymbolNUP88
Binding site3025,3048
Score0.923
Seed1
Au0.632
Energy-21.9
Binding len23
Me-6.236
Phylopstem3.1179811833333333
Phylopflank3.147588399999999
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure