Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCTGCAGGCAGCCAGC
..(((((((((....((((((.&))))))...))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320653
GeneSymbolNUP88
Binding site1383,1403
Score0.923
Seed1
Au0.485
Energy-22.2
Binding len20
Me-11.185
Phylopstem3.3838305000000006
Phylopflank2.26851919375
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure