Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCTAGAAGGGCTAAATCCTGCCT
....(((.((((((((((((((&)))))))))))))).........))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320653
GeneSymbolNUP88
Binding site3180,3207
Score0.846
Seed0
Au0.588
Energy-21.0
Binding len27
Me-11.86
Phylopstem3.995887157142857
Phylopflank4.252348247875
Longest consecutive pairings14
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure