Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCCAGGCATGGGCTGCCAGGTT
((((((((..(.((((......&.)))).)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001320664
GeneSymbolSHROOM2
Binding site2483,2506
Score0.923
Seed1
Au0.485
Energy-18.6
Binding len18
Me-9.583
Phylopstem-0.31170863000000004
Phylopflank0.07457079700000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure