Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCGGGAGGGCCGGG
..(((((.((((((.((((((.&)))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320664
GeneSymbolSHROOM2
Binding site214,233
Score0.923
Seed0
Au0.279
Energy-28.7
Binding len19
Me-8.006
Phylopstem1.0687164666666666
Phylopflank0.23621533
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure