Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTATGGGGGGTGGCCTGTGG
(((.((((((((((((((((((&)))))))).)))))).)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320664
GeneSymbolSHROOM2
Binding site4412,4437
Score0.846
Seed0
Au0.412
Energy-27.7
Binding len25
Me-6.97
Phylopstem1.0695881250000003
Phylopflank0.96380936
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure