Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCTGTGGAGGGCTCTGCCTATGGGGGGTG
..(((((.(((((((((((((&)).)).))))))))........).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001320664
GeneSymbolSHROOM2
Binding site4399,4429
Score0.846
Seed0
Au0.412
Energy-24.2
Binding len30
Me-7.271
Phylopstem0.5720302173913043
Phylopflank0.6435084862499999
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure