Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCATTCTGGAGTGCAGTGG
((((((((((....(((((.((&)))))))....))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320675
GeneSymbolBNIP2
Binding site3955,3978
Score0.923
Seed1
Au0.426
Energy-22.4
Binding len23
Me-12.255
Phylopstem0.7076607545454545
Phylopflank0.597313575
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure