Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAAGGCCAACTGGTGAGGGAAGTGGGGTA
..(((((((.(((((((((..&)))))))))...............))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001320675
GeneSymbolBNIP2
Binding site5146,5178
Score0.846
Seed1
Au0.574
Energy-24.4
Binding len32
Me-6.2
Phylopstem5.382567111111111
Phylopflank5.21499269625
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end6
Position3UTR
2D Structure