Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTTCAGAAAGTGGCAGTGA
(((((.(..((((((((((...&)))..))))))).).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320684
GeneSymbolPTPN20
Binding site459,480
Score0.846
Seed0
Au0.471
Energy-20.0
Binding len21
Me-9.209
Phylopstem-0.09117913333333329
Phylopflank-0.2863816775
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure