Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGCTGTTGCCAGGG
.(((((((.(((.((((((...&)))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001320704
GeneSymbolTTC3
Binding site5646,5664
Score0.846
Seed1
Au0.338
Energy-22.8
Binding len18
Me-6.139
Phylopstem-0.07232608571428568
Phylopflank-0.25293363874999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure