Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGGAAGGAAGAGGGGCCCCAGGAAAACAACCGACAGAATGCAGA
(((((.((((((((((.....&.))))))).)))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427405
GeneSymbolBTBD18
Binding site750,799
Score0.846
Seed0
Au0.485
Energy-19.9
Binding len20
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure