Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAGTTCCCTTGTTCTAGCTAGCAGCACGCTCCTCAGAGAGGGGGCCGAGTT
.(((((((((((((((((.((.&.)).)))))))))))).)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320739
GeneSymbolFAM107B
Binding site1856,1909
Score0.846
Seed1
Au0.441
Energy-24.8
Binding len24
Me-3.793
Phylopstem0.34212142631578946
Phylopflank-0.08135141750000002
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure