Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCAGCCAGTGG
((((((((.....((((((...&)))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320755
GeneSymbolSUPT6H
Binding site5092,5108
Score0.923
Seed1
Au0.412
Energy-22.9
Binding len16
Me-13.697
Phylopstem5.303024125
Phylopflank5.378299725
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure