Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGAGGTTAAAGAGACCCGTTCAGAGTCCTACAGTGG
(((((...(((((((((((...&))))))))))).........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320782
GeneSymbolZNF544
Binding site160,202
Score0.846
Seed0
Au0.456
Energy-20.3
Binding len42
Me-9.696
Phylopstem-1.063422227272727
Phylopflank-0.25826861000000007
Longest consecutive pairings11
Position of longest consecutive pairings31
Pairings in 3prime end5
Position5UTR
2D Structure