Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCGCACGGGAGCCAGCTGG
(((((((((((...(((((((.&)))))))...))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320835
GeneSymbolDENND4A
Binding site258,281
Score1.0
Seed1
Au0.382
Energy-26.8
Binding len23
Me-9.43
Phylopstem0.01722824999999999
Phylopflank0.16614238749999996
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end7
Position5UTR
2D Structure