Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCGGGAAAGGATGCCATGG
((.((((((((((((.(((...&))).)))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001320917
GeneSymbolCHRM5
Binding site4432,4452
Score0.846
Seed0
Au0.5
Energy-22.3
Binding len20
Me-5.728
Phylopstem-0.5538813076923077
Phylopflank0.02057771624999996
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure