Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTCCAGGGAGGTGGCTGAAGAGTGG
((((((((((((((((((((((&)))))))))))))).))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321020
GeneSymbolUBA52
Binding site828,856
Score1.0
Seed1
Au0.426
Energy-25.7
Binding len28
Me-3.938
Phylopstem0.03793987037037038
Phylopflank0.4026953812499999
Longest consecutive pairings14
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure