Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCCTGGGTCTGGTCTCCATGGCTGGCCGCGTTTGTTTGTGCCAGGG
.(((((((((((((((......&.))))).))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321025
GeneSymbolBOLA1
Binding site339,387
Score0.923
Seed1
Au0.309
Energy-18.4
Binding len20
Me-3.793
Phylopstem0.4398651388888889
Phylopflank0.24202420749999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure