Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAAGGGTGACATCCCAGGAGGGGCCTCTGA
((..(((.((((((((((....&.)))))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321066
GeneSymbolAPOC1
Binding site503,535
Score0.846
Seed0
Au0.397
Energy-24.6
Binding len19
Me-10.841
Phylopstem-0.3765432
Phylopflank-0.7708168112499998
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure