Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGCGGGACCAGA
..(((((((.(((((((((...&))))))))).))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321072
GeneSymbolCBS
Binding site1943,1962
Score0.846
Seed1
Au0.324
Energy-23.4
Binding len19
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure