Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTCCACGCCAGCGAGGCCCAGGAGGGACTCCAGAAGTTCAAGGTGGTGAGAGCTGGTGT
(((((((((((((((((((...&.))))))))))))........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321118
GeneSymbolCCDC115
Binding site636,700
Score0.846
Seed1
Au0.338
Energy-26.9
Binding len45
Me-3.938
Phylopstem-0.03174852790697673
Phylopflank-0.06527871750000003
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure