Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTGCTATGCGGGGC
.(((.(((((....((((((((&))))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321124
GeneSymbolPINLYP
Binding site372,390
Score0.846
Seed0
Au0.529
Energy-15.5
Binding len18
Me-16.23
Phylopstem1.5821562
Phylopflank1.2540454374999999
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure