Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTGCAAGTACTGCTTTGTGTACGGCCAGGA
.((((((((((((.((((((((&.)))).)))).))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321216
GeneSymbolB9D1
Binding site236,270
Score0.808
Seed1
Au0.382
Energy-21.2
Binding len27
Me-4.65
Phylopstem4.539134673333334
Phylopflank2.1601669825
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure