Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGAGAGGGGCTGGCAGGTGG
(((((((((((((((((.....&)))))))))))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321218
GeneSymbolB9D1
Binding site2369,2391
Score0.846
Seed1
Au0.441
Energy-26.6
Binding len22
Me-3.938
Phylopstem-0.42045619047619054
Phylopflank-0.15173606874999995
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure