Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGGAAAGGGGGGCAGCTCAGTGG
(((((((((((((((((((...&))))))))......))))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321228
GeneSymbolHDAC6
Binding site4077,4107
Score0.923
Seed1
Au0.426
Energy-25.9
Binding len30
Me-3.938
Phylopstem0.23321246896551728
Phylopflank0.3362706587499999
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end5
Position3UTR
2D Structure