Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGCCTACATGTGTGCTAA
...((((((((.((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321291
GeneSymbolUSP36
Binding site1478,1499
Score0.846
Seed0
Au0.515
Energy-18.2
Binding len16
Me-9.861
Phylopstem-0.70717725
Phylopflank-0.10470869000000001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure