Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGGGGGCGGTTTCCCATGGGATGTGAAAGGCTGGCCAT
...((((((((((((((((...&)))))))))))..........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321368
GeneSymbolCD99
Binding site851,894
Score0.846
Seed0
Au0.485
Energy-21.4
Binding len43
Me-6.515
Phylopstem-0.01941553404761906
Phylopflank-0.222847326625
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end5
Position3UTR
2D Structure