Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTCCATGAGAAAGGTTTCATTGAAATCAAACCCACCTTCAGCCAGTT
.(((((((((((((((((((((&))))))))...)))))).........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001347827
GeneSymbolPDGFRA
Binding site1056,1106
Score0.872
Seed1
Au0.559
Energy-21.3
Binding len50
Me-3.793
Phylopstem2.399734036734693
Phylopflank2.6473659974999997
Longest consecutive pairings8
Position of longest consecutive pairings42
Pairings in 3prime end8
PositionCDS
2D Structure