Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTGGCCAGGA
.((((((...(((.((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001321389
GeneSymbolCNPPD1
Binding site1562,1576
Score0.846
Seed1
Au0.382
Energy-16.0
Binding len14
Me-9.263
Phylopstem5.365043333333333
Phylopflank5.365960519974999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure