Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTCAGCCCTTTGCGCCTCTAACCCTCCTCAGCTGAGCTGCAGT
((((((((.((((((...(((&.))).....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427605
GeneSymbolCCDC82
Binding site222,269
Score0.923
Seed1
Au0.353
Energy-21.5
Binding len24
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure