Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTACCTACAATGAATGGAGAGTCAGTAGACCCAGTGGGGCAGCCAGC
..((((((((((.((((((...&.)))))).)))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001321441
GeneSymbolAHSA1
Binding site526,575
Score0.846
Seed1
Au0.456
Energy-27.4
Binding len20
Me-6.246
Phylopstem3.940398545454545
Phylopflank3.2898121717499995
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure